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Smithsonian Research Bibliography



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Author = Calabrese, J
Resulted in: 29 items


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ctmm: An R package for analyzing animal relocation data as a continuous-time stochastic process Calabrese, Justin M. Fleming, Chris H. Gurarie, Eliezer 2016 DOI: info:10.1111/2041-210X.12559 Methods in Ecology and Evolution
Calabrese, Justin M., Fleming, Chris H. and Gurarie, Eliezer. 2016. ctmm: An R package for analyzing animal relocation data as a continuous-time stochastic process. Methods in Ecology and Evolution, doi:10.1111/2041-210X.12559

Estimating where and how animals travel: An optimal framework for path reconstruction from autocorrelated tracking data Fleming, Chris H. Fagan, William F. Mueller, Thomas Olson, Kirk A. Leimgruber, Peter Calabrese, Justin M. 2016 DOI: info:10.1890/15-1607.1 Ecology v. 97 No. 3
Fleming, Chris H., Fagan, William F., Mueller, Thomas, Olson, Kirk A., Leimgruber, Peter and Calabrese, Justin M. 2016. Estimating where and how animals travel: An optimal framework for path reconstruction from autocorrelated tracking data. Ecology, 97(3): 576-582. doi:10.1890/15-1607.1

Uncovering periodic patterns of space use in animal tracking data with periodograms, including a new algorithm for the Lomb-Scargle periodogram and improved randomization tests Péron, Guillaume Fleming, Chris H. de Paula, Rogerio C. Calabrese, Justin M. 2016 DOI: info:10.1186/s**************** Movement Ecology v. 4 No. 1
Péron, Guillaume, Fleming, Chris H., de Paula, Rogerio C. and Calabrese, Justin M. 2016. Uncovering periodic patterns of space use in animal tracking data with periodograms, including a new algorithm for the Lomb-Scargle periodogram and improved randomization tests. Movement Ecology, 4(1) doi:10.1186/s****************

Rigorous home range estimation with movement data: a new autocorrelated kernel density estimator Fleming, C. H. Fagan, W. F. Mueller, T. Olson, Kirk A. Leimgruber, Peter Calabrese, Justin M. 2015 DOI: info:10.1890/14-2010.1 Ecology v. 96 No. 5
Fleming, C. H., Fagan, W. F., Mueller, T., Olson, Kirk A., Leimgruber, Peter and Calabrese, Justin M. 2015. Rigorous home range estimation with movement data: a new autocorrelated kernel density estimator. Ecology, 96(5): 1182-1188. doi:10.1890/14-2010.1

Maximum-entropy description of animal movement Fleming, Chris H. Suba??, Yi?it Calabrese, Justin M. 2015 DOI: info:10.1103/PhysRevE.91.032107 Physical Review E v. 91 No. 3
Fleming, Chris H., Suba??, Yi?it and Calabrese, Justin M. 2015. Maximum-entropy description of animal movement. Physical Review E, 91(3) doi:10.1103/PhysRevE.91.032107

Comparative movement analysis for a sympatric dhole and golden jackal in a human-dominated landscape Jenks, Kate E. Aikens, Ellen O. Songsasen, Nucharin Calabrese, Justin Fleming, Chris Bhumpakphan, Naris Wanghongsa, Sawai Kanchanasaka, Budsabong Songer, Melissa Leimgruber, Peter 2015 Raffles Bulletin of Zoology v. 63
Jenks, Kate E., Aikens, Ellen O., Songsasen, Nucharin, Calabrese, Justin, Fleming, Chris, Bhumpakphan, Naris, Wanghongsa, Sawai, Kanchanasaka, Budsabong, Songer, Melissa and Leimgruber, Peter. 2015. Comparative movement analysis for a sympatric dhole and golden jackal in a human-dominated landscape. Raffles Bulletin of Zoology, 63: 546-554.

How far to go? Determinants of migration distance in land mammals Teitelbaum, Claire S. Fagan, William F. Fleming, Chris H. Dressler, Gunnar Calabrese, Justin M. Leimgruber, Peter Mueller, Thomas 2015 DOI: info:10.1111/ele.12435 Ecology Letters v. 18 No. 6
Teitelbaum, Claire S., Fagan, William F., Fleming, Chris H., Dressler, Gunnar, Calabrese, Justin M., Leimgruber, Peter and Mueller, Thomas. 2015. How far to go? Determinants of migration distance in land mammals. Ecology Letters, 18(6): 545-552. doi:10.1111/ele.12435

Exploring the tug of war between positive and negative interactions among savanna trees: Competition, dispersal, and protection from fire Bacelar, Flora S. Calabrese, Justin M. Hernández-García, Emilio 2014 DOI: info:10.1016/j.ecocom.2013.11.007 Ecological Complexity v. 17
Bacelar, Flora S., Calabrese, Justin M. and Hernández-García, Emilio. 2014. Exploring the tug of war between positive and negative interactions among savanna trees: Competition, dispersal, and protection from fire. Ecological Complexity, 17: 140-148. doi:10.1016/j.ecocom.2013.11.007

Conserving the World's Finest Grassland Amidst Ambitious National Development Batsaikhan, Nyamsuren Buuveibaatar, Bayarbaatar Chimed, Bazaar Enkhtuya, Oidov Galbrakh, Davaa Ganbaatar, Oyunsaikhan Lkhagvasuren, Badamjav Nandintsetseg, Dejid Berger, Joel Calabrese, Justin M. Edwards, Ann E. Fagan, William F. Fuller, Todd K. Heiner, Michael Ito, Takehiko Y. Kaczensky, Petra Leimgruber, Peter Lushchekina, Anna Milner-Gulland, E. Mueller, Thomas Murray, Martyn G. Olson, Kirk A. Reading, Richard Schaller, George B. Stubbe, Annagret Stubbe, Michael Walzer, Chris Von Wehrden, Henrik Whitten, Tony 2014 DOI: info:10.1111/cobi.12297 Conservation Biology v. 28 No. 6
Batsaikhan, Nyamsuren, Buuveibaatar, Bayarbaatar, Chimed, Bazaar, Enkhtuya, Oidov, Galbrakh, Davaa, Ganbaatar, Oyunsaikhan, Lkhagvasuren, Badamjav, Nandintsetseg, Dejid, Berger, Joel, Calabrese, Justin M., Edwards, Ann E., Fagan, William F., Fuller, Todd K., Heiner, Michael, Ito, Takehiko Y., Kaczensky, Petra, Leimgruber, Peter, Lushchekina, Anna, Milner-Gulland, E., Mueller, Thomas, Murray, Martyn G., Olson, Kirk A., Reading, Richard, Schaller, George B., Stubbe, Annagret, et al. 2014. Conserving the World's Finest Grassland Amidst Ambitious National Development. Conservation Biology, 28(6): 1736-1739. doi:10.1111/cobi.12297

Stacking species distribution models and adjusting bias by linking them to macroecological models Calabrese, Justin M. Certain, Grégoire Kraan, Casper Dormann, Carsten F. 2014 DOI: info:10.1111/geb.12102 Global Ecology and Biogeography v. 23 No. 1
Calabrese, Justin M., Certain, Grégoire, Kraan, Casper and Dormann, Carsten F. 2014. Stacking species distribution models and adjusting bias by linking them to macroecological models. Global Ecology and Biogeography, 23(1): 99-112. doi:10.1111/geb.12102

The Correlated Random Walk and the Rise of Movement Ecology Fagan, William F. Calabrese, Justin M. 2014 DOI: info:10.1890/0012-9623-95.3.204 Bulletin of the Ecological Society of America v. 95 No. 3
Fagan, William F. and Calabrese, Justin M. 2014. The Correlated Random Walk and the Rise of Movement Ecology. Bulletin of the Ecological Society of America, 95(3): 204-206. doi:10.1890/0012-9623-95.3.204

From Fine-Scale Foraging to Home Ranges: A Semivariance Approach to Identifying Movement Modes across Spatiotemporal Scales Fleming, Chris H. Calabrese, Justin M. Mueller, Thomas Olson, Kirk A. Leimgruber, Peter Fagan, William F. 2014 DOI: info:10.1086/675504 The American Naturalist v. 183 No. 5
Fleming, Chris H., Calabrese, Justin M., Mueller, Thomas, Olson, Kirk A., Leimgruber, Peter and Fagan, William F. 2014. From Fine-Scale Foraging to Home Ranges: A Semivariance Approach to Identifying Movement Modes across Spatiotemporal Scales. The American Naturalist, 183(5): E154-E167. doi:10.1086/675504

Non-Markovian maximum likelihood estimation of autocorrelated movement processes Fleming, Christian H. Calabrese, Justin M. Mueller, Thomas Olson, Kirk A. Leimgruber, Peter Fagan, William F. 2014 DOI: info:10.1111/2041-210X.12176 Methods in Ecology and Evolution v. 5 No. 5
Fleming, Christian H., Calabrese, Justin M., Mueller, Thomas, Olson, Kirk A., Leimgruber, Peter and Fagan, William F. 2014. Non-Markovian maximum likelihood estimation of autocorrelated movement processes. Methods in Ecology and Evolution, 5(5): 462-472. doi:10.1111/2041-210X.12176

How climate extremes - not means - define a species' geographic range boundary via a demographic tipping point Lynch, Heather J. Rhainds, Marc Calabrese, Justin M. Cantrell, Stephen Cosner, Chris Fagan, William F. 2014 DOI: info:10.1890/12-2235.1 Ecological Monographs v. 84 No. 1
Lynch, Heather J., Rhainds, Marc, Calabrese, Justin M., Cantrell, Stephen, Cosner, Chris and Fagan, William F. 2014. How climate extremes - not means - define a species' geographic range boundary via a demographic tipping point. Ecological Monographs, 84(1): 131-149. doi:10.1890/12-2235.1

Optimal search in interacting populations: Gaussian jumps versus Lévy flights Martínez-García, Ricardo Calabrese, Justin M. López, Cristóbal 2014 DOI: info:10.1103/PhysRevE.89.032718 Physical Review E v. 89 No. 3
Martínez-García, Ricardo, Calabrese, Justin M. and López, Cristóbal. 2014. Optimal search in interacting populations: Gaussian jumps versus Lévy flights. Physical Review E, 89(3) doi:10.1103/PhysRevE.89.032718

Minimal mechanisms for vegetation patterns in semiarid regions Martínez-García, Ricardo Calabrese, Justin M. Hernández-García, Emilio López, Cristóbal 2014 DOI: info:10.1098/rsta.2014.0068 Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences v. 372 No. 2027
Martínez-García, Ricardo, Calabrese, Justin M., Hernández-García, Emilio and López, Cristóbal. 2014. Minimal mechanisms for vegetation patterns in semiarid regions. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, 372(2027) doi:10.1098/rsta.2014.0068

How protandry and protogyny affect female mating failure: a spatial population model Larsen, Elise Calabrese, Justin M. Rhainds, Marc Fagan, William F. 2013 DOI: info:10.1111/eea.12003 Entomologia Experimentalis Et Applicata v. 146 No. 1
Larsen, Elise, Calabrese, Justin M., Rhainds, Marc and Fagan, William F. 2013. How protandry and protogyny affect female mating failure: a spatial population model. Entomologia Experimentalis Et Applicata, 146(1): 130-140. doi:10.1111/eea.12003

Spatial patterns in mesic savannas: The local facilitation limit and the role of demographic stochasticity Martínez-García, Ricardo Calabrese, Justin M. López, Cristóbal 2013 DOI: info:10.1016/j.jtbi.2013.05.024 Journal of Theoretical Biology v. 333
Martínez-García, Ricardo, Calabrese, Justin M. and López, Cristóbal. 2013. Spatial patterns in mesic savannas: The local facilitation limit and the role of demographic stochasticity. Journal of Theoretical Biology, 333: 156-165. doi:10.1016/j.jtbi.2013.05.024

Vegetation pattern formation in semiarid systems without facilitative mechanisms Martínez-García, Ricardo Calabrese, Justin M. Hernández-García, Emilio López, Cristóbal 2013 DOI: info:10.1002/2013GL058797 Geophysical Research Letters v. 40 No. 23
Martínez-García, Ricardo, Calabrese, Justin M., Hernández-García, Emilio and López, Cristóbal. 2013. Vegetation pattern formation in semiarid systems without facilitative mechanisms. Geophysical Research Letters, 40(23): 6143-6147. doi:10.1002/2013GL058797

Optimizing the Search for Resources by Sharing Information: Mongolian Gazelles as a Case Study Martinez-Garcia, Ricardo Calabrese, Justin M. Mueller, Thomas Olson, Kirk A. Lopez, Cristobal 2013 DOI: info:10.1103/PhysRevLett.110.248106 Physical Review Letters v. 110 No. 24
Martinez-Garcia, Ricardo, Calabrese, Justin M., Mueller, Thomas, Olson, Kirk A. and Lopez, Cristobal. 2013. Optimizing the Search for Resources by Sharing Information: Mongolian Gazelles as a Case Study. Physical Review Letters, 110(24) doi:10.1103/PhysRevLett.110.248106

How emergence and death assumptions affect count-based estimates of butterfly abundance and lifespan Calabrese, Justin M. 2012 DOI: info:10.1007/s10144-012-0316-7 Population Ecology v. 54 No. 3
Calabrese, Justin M. 2012. How emergence and death assumptions affect count-based estimates of butterfly abundance and lifespan. Population Ecology, 54(3): 431-442. doi:10.1007/s10144-012-0316-7

Partitioning the Aggregation of Parasites on Hosts into Intrinsic and Extrinsic Components via an Extended Poisson-Gamma Mixture Model Calabrese, Justin M. Brunner, Jesse L. Ostfeld, Richard S. 2011 DOI: info:10.1371/journal.pone.0029215 PLoS ONE v. 6 No. 12
Calabrese, Justin M., Brunner, Jesse L. and Ostfeld, Richard S. 2011. Partitioning the Aggregation of Parasites on Hosts into Intrinsic and Extrinsic Components via an Extended Poisson-Gamma Mixture Model. PLoS ONE, 6(12): e29215 doi:10.1371/journal.pone.0029215

Calabrese, Justin M., Deffuant, Guillaume and Grimm, Volker. 2011. Bridging the Gap Between Computational Models and Viability Based Resilience in Savanna Ecosystems. In: Deffuant, Guillaume and Gilbert, Nigel, Viability and Resilience of Complex Systems. Berlin, Heidelberg: Springer Berlin Heidelberg, pp.107-130.

Statistical inference for stochastic simulation models – theory and application Hartig, Florian Calabrese, Justin M. Reineking, Björn Wiegand, Thorsten Huth, Andreas 2011 DOI: info:10.1111/j.1461-0248.2011.01640.x Ecology Letters v. 14 No. 8
Hartig, Florian, Calabrese, Justin M., Reineking, Björn, Wiegand, Thorsten and Huth, Andreas. 2011. Statistical inference for stochastic simulation models – theory and application. Ecology Letters, 14(8): 816-827. doi:10.1111/j.1461-0248.2011.01640.x

Martin, Sophie, Deffuant, Guillaume and Calabrese, Justin M. 2011. Defining Resilience Mathematically: from attractors to viability. In: Deffuant, Guillaume and Gilbert, Nigel, Viability and Resilience of Complex Systems: Concepts, Methods and Case Studies from Ecology and Society. Springer, pp.15-38.

How landscape dynamics link individual-to population-level movement patterns: a multispecies comparison of ungulate relocation data Mueller, Thomas Olson, Kirk A. Dressler, Gunnar Leimgruber, Peter Fuller, Todd K. Nicolson, Craig Novaro, Andres J. Bolgeri, Maria J. Wattles, David DeStefano, Stephen Calabrese, Justin M. Fagan, William F. 2011 DOI: info:10.111/j.1466-8238.2010.00638.x Global Ecology and Biogeography v. 20 No. 5
Mueller, Thomas, Olson, Kirk A., Dressler, Gunnar, Leimgruber, Peter, Fuller, Todd K., Nicolson, Craig, Novaro, Andres J., Bolgeri, Maria J., Wattles, David, DeStefano, Stephen, Calabrese, Justin M. and Fagan, William F. 2011. How landscape dynamics link individual-to population-level movement patterns: a multispecies comparison of ungulate relocation data. Global Ecology and Biogeography, 20(5): 683-694. doi:10.111/j.1466-8238.2010.00638.x

Impact of single-sex and mixed-sex group housing of boars vaccinated against GnRF or physically castrated on body lesions, feeding behaviour and weight gain Schmidt, Tatjana Calabrese, Justin M. Grodzycki, Mario Paulick, Marleen Pearce, Michael C. Rau, Franziska von Borell, Eberhard 2011 DOI: info:10.1016/j.applanim.2010.11.019 Applied Animal Behaviour Science v. 130 No. 1
Schmidt, Tatjana, Calabrese, Justin M., Grodzycki, Mario, Paulick, Marleen, Pearce, Michael C., Rau, Franziska and von Borell, Eberhard. 2011. Impact of single-sex and mixed-sex group housing of boars vaccinated against GnRF or physically castrated on body lesions, feeding behaviour and weight gain. Applied Animal Behaviour Science, 130(1): 42-52. doi:10.1016/j.applanim.2010.11.019

Volker, Grimm and Calabrese, Justin M. 2011. What is Resilience? A Short Introduction. In: Deffuant, Guillaume and Gilbert, Nigel, Viability and Resilience of Complex Systems: Concepts, Methods and Case Studies from Ecology and Society. Berlin: Springer, pp.3-13.

Predicting population and community dynamics: The type of aggregation matters Meyer, Katrin M. Schiffers, Katja Münkemüller, Tamara Schädler, Martin Calabrese, Justin M. Basset, Alberto Breulmann, Marc Duquesne, Sabine Hidding, Bert Huth, Andreas Schöb, Christian van, de Voorde,Tess F. J. 2010 DOI: info:10.1016/j.baae.2010.08.001 Basic and Applied Ecology v. 11 No. 7
Meyer, Katrin M., Schiffers, Katja, Münkemüller, Tamara, Schädler, Martin, Calabrese, Justin M., Basset, Alberto, Breulmann, Marc, Duquesne, Sabine, Hidding, Bert, Huth, Andreas, Schöb, Christian and van, de Voorde,Tess F. J. 2010. Predicting population and community dynamics: The type of aggregation matters. Basic and Applied Ecology, 11(7): 563-571. doi:10.1016/j.baae.2010.08.001