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Showing 41-60 of about 1272 results.
Cryptic Diversity of Black Band Disease Cyanobacteria in Siderastrea siderea Corals Revealed by Chemical Ecology and Comparative Genome-Resolved MetagenomicsDOI: info:10.3390/md21020076v. 21No. 2MDPI
Meyer, Julie L., Gunasekera, Sarath P., Brown, Anya L., Ding, Yousong, Miller, Stephanie, Teplitski, Max, and Paul, Valerie J. 2023. "Cryptic Diversity of Black Band Disease Cyanobacteria in Siderastrea siderea Corals Revealed by Chemical Ecology and Comparative Genome-Resolved Metagenomics." Marine Drugs, 21, (2). https://doi.org/10.3390/md21020076.
Rapid prototyping for quantifying belief weights of competing hypotheses about emergent diseasesDOI: info:10.1016/j.jenvman.2023.117668v. 337
Robertson, Ellen P., Walsh, Daniel P., Martin, Julien, Work, Thierry M., Kellogg, Christina A., Evans, James S., Barker, Victoria, Hawthorn, Aine, Aeby, Greta, Paul, Valerie J., Walker, Brian K., Kiryu, Yasunari, Woodley, Cheryl M., Meyer, Julie L., Rosales, Stephanie M., Studivan, Michael, Moore, Jennifer F., Brandt, Marilyn E., and Bruckner, Andrew. 2023. "Rapid prototyping for quantifying belief weights of competing hypotheses about emergent diseases." Journal of environmental management, 337. https://doi.org/10.1016/j.jenvman.2023.117668.
The mitochondrial genome of the mountain wooly tapir, and a formal test of the effect of altitude on the adaptive evolution of mitochondrial protein coding genes in odd-toed ungulatesDOI: info:10.1186/s12864-023-09596-8v. 24No. 1BMC527
Gutiérrez, Edgar G., Ortega, Jorge, Savoie, Avery, and Baeza, J. Antonio. 2023. "The mitochondrial genome of the mountain wooly tapir, Tapirus pinchaque and a formal test of the effect of altitude on the adaptive evolution of mitochondrial protein coding genes in odd-toed ungulates." Bmc Genomics, 24, (1) 527. https://doi.org/10.1186/s12864-023-09596-8.
Oyster Reefs Are Reservoirs for Potential Pathogens in a Highly Disturbed Subtropical EstuaryDOI: info:10.3390/environments10120205v. 10No. 12
Sweat, L. Holly, Busch, Sidney J., Craig, Casey A., Dark, Emily, Sailor-Tynes, Tess, Wayles, Jessy, Sacks, Paul E., and Walters, Linda J. 2023. "Oyster Reefs Are Reservoirs for Potential Pathogens in a Highly Disturbed Subtropical Estuary." Environments, 10, (12). https://doi.org/10.3390/environments10120205.
A first genomic portrait of the deep-water azooxanthellate reef-building coral : genome size, repetitive elements, nuclear RNA gene operon, mitochondrial genome, and phylogenetic placement in the family PocilloporidaeDOI: info:10.1007/s00338-023-02419-yv. 42No. 61241–1256
Tucker, Joshua, Barrios, Lina M., Preziosi, Richard, and Baeza, J. Antonio. 2023. "A first genomic portrait of the deep-water azooxanthellate reef-building coral Madracis myriaster: genome size, repetitive elements, nuclear RNA gene operon, mitochondrial genome, and phylogenetic placement in the family Pocilloporidae." Coral Reefs, 42, (6) 1241–1256. https://doi.org/10.1007/s00338-023-02419-y.
Chemical and genomic characterization of a potential probiotic treatment for stony coral tissue loss diseaseDOI: info:10.1038/s42003-023-04590-yv. 6No. 1
Ushijima, Blake, Gunasekera, Sarath P., Meyer, Julie L., Tittl, Jessica, Pitts, Kelly A., Thompson, Sharon, Sneed, Jennifer M., Ding, Yousong, Chen, Manyun, Jay Houk, L., Aeby, Greta S., Häse, Claudia C., and Paul, Valerie J. 2023. "Chemical and genomic characterization of a potential probiotic treatment for stony coral tissue loss disease." Communications Biology, 6, (1). https://doi.org/10.1038/s42003-023-04590-y.
The mitochondrial genomes of big-eared bats, Macrotus waterhousii and Macrotus californicus (Chiroptera: Phyllostomidae: Macrotinae)DOI: info:10.1016/j.gene.2023.147295v. 863147295
Vargas-Trejo, Karen J., Ortega, Jorge, Gutiérrez-Guerrero, Yocelyn T., Gutiérrez, Edgar G., and Baeza, J. Antonio. 2023. "The mitochondrial genomes of big-eared bats, Macrotus waterhousii and Macrotus californicus (Chiroptera: Phyllostomidae: Macrotinae)." Gene, 863 147295. https://doi.org/10.1016/j.gene.2023.147295.
Ethanol preservation and pretreatments facilitate quality DNA extractions in recalcitrant plant speciesDOI: info:10.1002/aps3.11519
Johnson, Gabriel, Canty, Steven W. J., Lichter‐Marck, Isaac H., Wagner, Warren, and Wen, Jun. 2023. "Ethanol preservation and pretreatments facilitate quality DNA extractions in recalcitrant plant species." Applications in Plant Sciences, https://doi.org/10.1002/aps3.11519.
Unresolved taxonomy confounds invasive species identification: the Lysmata vittata Stimpson, 1860 (Decapoda: Caridea: Lysmatidae) species complex and recent introduction of Lysmata vittata sensu stricto in the western AtlanticDOI: info:10.1093/jcbiol/ruab079v. 42No. 1Oxford University Press
Aguilar, Robert, Prakash, Sanjeevi, Ogburn, Matthew B., Lohan, Katrina M. Pagenkopp, Macdonald, Kenneth S., Driskell, Amy C., Ahyong, Shane T., Leray, Matthieu, McIlroy, Shelby E., Tuckey, Troy D., and Baeza, J. Antonio. 2022. "Unresolved taxonomy confounds invasive species identification: the Lysmata vittata Stimpson, 1860 (Decapoda: Caridea: Lysmatidae) species complex and recent introduction of Lysmata vittata sensu stricto in the western Atlantic." Journal of Crustacean Biology, 42, (1). https://doi.org/10.1093/jcbiol/ruab079.
Twenty years of change in benthic communities across the Belizean Barrier ReefDOI: info:10.1371/journal.pone.0249155v. 17No. 1Public Library of Science
Alves, Catherine, Valdivia, Abel, Aronson, Richard B., Bood, Nadia, Castillo, Karl D., Cox, Courtney, Fieseler, Clare, Locklear, Zachary, McField, Melanie, Mudge, Laura, Umbanhowar, James, and Bruno, John F. 2022. "Twenty years of change in benthic communities across the Belizean Barrier Reef." PLOS ONE, 17, (1). https://doi.org/10.1371/journal.pone.0249155.
Mitochondrial genomes assembled from non-invasive eDNA metagenomic scat samples in the endangered Amur tiger DOI: info:10.7717/peerj.14428v. 10
Baeza, J. A. 2022. "Mitochondrial genomes assembled from non-invasive eDNA metagenomic scat samples in the endangered Amur tiger Panthera tigris altaica." PeerJ, 10. https://doi.org/10.7717/peerj.14428.
The complete mitochondrial genome of the roosterfish Nematistius pectoralis Gill 1862: Purifying selection in protein coding genes, organization of the control region, and insights into family-level phylogenomic relationships in the recently erected order CarangiformesDOI: info:10.1016/j.gene.2022.146847v. 845
Molina‐Quirós, José Luis, Hernández-Muñoz, Sebastián, and Baeza, J. A. 2022. "The complete mitochondrial genome of the roosterfish Nematistius pectoralis Gill 1862: Purifying selection in protein coding genes, organization of the control region, and insights into family-level phylogenomic relationships in the recently erected order Carangiformes." Gene, 845. https://doi.org/10.1016/j.gene.2022.146847.
De novo assembly and functional annotation of the nervous system transcriptome in the Caribbean spiny lobster Panulirus argusDOI: info:10.1007/s00338-021-02213-8Springer
Baeza, J. Antonio, Veldsman, Werner P., and Chu, Ka Hou. 2022. "De novo assembly and functional annotation of the nervous system transcriptome in the Caribbean spiny lobster Panulirus argus." Coral Reefs, https://doi.org/10.1007/s00338-021-02213-8.
Characterization of the complete mitochondrial genome of the Atlantic seabob shrimp Xiphopenaeus kroyeri Heller, 1862 (Decapoda: Dendrobranchiata: Penaeidae), with insights into the phylogeny of PenaeidaeDOI: info:10.1093/jcbiol/ruac004v. 42No. 1Oxford University Press
Cronin, Timothy J., Conrad, Isabelle, Kerkhove, Thomas R. H., Hellemans, Bart, De Troch, Marleen, Volckaert, Filip A. M., and Baeza, J. Antonio. 2022. "Characterization of the complete mitochondrial genome of the Atlantic seabob shrimp Xiphopenaeus kroyeri Heller, 1862 (Decapoda: Dendrobranchiata: Penaeidae), with insights into the phylogeny of Penaeidae." Journal of Crustacean Biology, 42, (1). https://doi.org/10.1093/jcbiol/ruac004.
The complete mitochondrial genome of the spot prawn, Pandalus platyceros Brandt in von Middendorf, 1851 (Decapoda: Caridea: Pandalidae), assembled from linked-reads sequencingDOI: info:10.1093/jcbiol/ruac003v. 42No. 1Oxford University Press
Cronin, Timothy J., Jones, Steven J. M., and Baeza, J. Antonio. 2022. "The complete mitochondrial genome of the spot prawn, Pandalus platyceros Brandt in von Middendorf, 1851 (Decapoda: Caridea: Pandalidae), assembled from linked-reads sequencing." Journal of Crustacean Biology, 42, (1). https://doi.org/10.1093/jcbiol/ruac003.
Are we there yet? Benchmarking low-coverage nanopore long-read sequencing for the assembling of mitochondrial genomes using the vulnerable silky shark Carcharhinus falciformisDOI: info:10.1186/s12864-022-08482-zv. 23No. 1BMC
Baeza, J. Antonio and Garcia-De Leon, F. J. 2022. "Are we there yet? Benchmarking low-coverage nanopore long-read sequencing for the assembling of mitochondrial genomes using the vulnerable silky shark Carcharhinus falciformis." Bmc Genomics, 23, (1). https://doi.org/10.1186/s12864-022-08482-z.
Genomic Survey and Resources for the Boring Giant Clam DOI: info:10.3390/genes13050903v. 13No. 5MDPI
Baeza, J. Antonio, Neo, Mei Lin, and Huang, Danwei. 2022. "Genomic Survey and Resources for the Boring Giant Clam Tridacna crocea." Genes, 13, (5). https://doi.org/10.3390/genes13050903.
Genome survey sequencing of the phyto-parasitic nematode Hoplolaimus galeatusDOI: info:10.7717/peerj.12749v. 10PEERJ Incorporated
Ma, Xinyuan, Agudelo, Paula, Richards, Vincent P., and Baeza, J. Antonio. 2022. "Genome survey sequencing of the phyto-parasitic nematode Hoplolaimus galeatus." Peerj, 10. https://doi.org/10.7717/peerj.12749.
Discovery, Synthesis, and Biological Evaluation of Anaenamides C and D from a New Marine Cyanobacterium, Hormoscilla sp brDOI: info:10.1021/acs.jnatprod.1c01073v. 85No. 3American Chemical Society581–589
Brumley, David A., Gunasekera, Sarath P., Sauvage, Thomas, dos Santos, Larissa A. H., Chen, Qi-Yin, Paul, Valerie J., and Luesch, Hendrik. 2022. "Discovery, Synthesis, and Biological Evaluation of Anaenamides C and D from a New Marine Cyanobacterium, Hormoscilla sp br." Journal of natural products, 85, (3) 581–589. https://doi.org/10.1021/acs.jnatprod.1c01073.
Mapping a conservation research network to the Sustainable Development GoalsDOI: info:10.1111/csp2.12731Wiley
Canty, Steven W. J., Nowakowski, A. J., Connette, Grant M., Deichmann, Jessica L., Songer, Melissa, Chiaravalloti, Rafael, Dodge, Molly, Feistner, Anna T. C., Fergus, Craig, Hall, Jefferson S., Komatsu, Kimberly J., Linares‐Palomino, Reynaldo, McField, Melanie, Ogburn, Matthew B., Velez‐Zuazo, Ximena, and Akre, Thomas S. 2022. "Mapping a conservation research network to the Sustainable Development Goals." Conservation Science and Practice, https://doi.org/10.1111/csp2.12731.