Search Results
Showing 1-20 of about 73 results.
Museum genomics provide insight into the extinction of a specialist North American warbler speciesDOI: info:10.1038/s41598-024-67595-5v. 14No. 1
Byerly, Paige A., Kearns, Anna M., Welch, Andreanna, Ochirbat, Margad-Erdene, Marra, Peter P., Wilson, Amy, Campana, Michael G., and Fleischer, Robert C. 2024. "Museum genomics provide insight into the extinction of a specialist North American warbler species." Scientific Reports, 14, (1). https://doi.org/10.1038/s41598-024-67595-5.
Untangling the colonization history of the Australo-Pacific reed warblers, one of the world’s great island radiationsDOI: info:10.1093/evolut/qpae136
Kearns, Anna M., Campana, Michael G., Slikas, Beth, Berry, Lainie, Saitoh, Takema, Graves, Gary R., Cibois, Alice, and Fleischer, Robert C. 2024. "Untangling the colonization history of the Australo-Pacific reed warblers, one of the world’s great island radiations." Evolution, https://doi.org/10.1093/evolut/qpae136.
Reduction of genetic diversity in ‘Alalā (Hawaiian crow; ) between the late 1800s and the late 1900sDOI: info:10.1093/jhered/esad063
Blanchet, Geneviève, Bellinger, M. R., Kearns, Anna M., Cortes-Rodriguez, Nandadevi, Masuda, Bryce, Campana, Michael G., Rutz, Christian, Fleischer, Robert C., and Sutton, Jolene T. 2023. "Reduction of genetic diversity in ‘Alalā (Hawaiian crow; Corvus hawaiiensis ) between the late 1800s and the late 1900s." Journal of Heredity, https://doi.org/10.1093/jhered/esad063.
RatesTools: a Nextflow pipeline for detecting germline mutations in pedigree sequence dataDOI: info:10.1093/bioinformatics/btac784v. 39No. 1btac784
Armstrong, Ellie E. and Campana, Michael G. 2023. "RatesTools: a Nextflow pipeline for detecting de novo germline mutations in pedigree sequence data." Bioinformatics, 39, (1) btac784. https://doi.org/10.1093/bioinformatics/btac784.
Annotations for ‘akiapōlā‘au and Hawai‘i ‘amakihi genomesDOI: info:10.25573/DATA.22096610.V2Smithsonian National Zoo and Conservation Biology Institute
Campana, Michael G., Corvelo, André, Shelton, Jennifer, Callicrate, Taylor E., Bunting, Karen L., Riley-Gillis, Bridget, Wos, Frank, DeGrazia, Justin, Jarvis, Erich D., and Fleischer, Robert C. 2023. [Dataset] Annotations for ‘akiapōlā‘au and Hawai‘i ‘amakihi genomes. Distributed by Washington, DC: Smithsonian National Zoo and Conservation Biology Institute. https://doi.org/10.25573/DATA.22096610.V2.
Supplemental Data for "Gene expression reveals immune response strategies of naïve Hawaiian honeycreepers experimentally infected with introduced avian malaria"DOI: info:10.25573/DATA.22096553.V1Smithsonian National Zoo and Conservation Biology Institute
Paxton, Kristina L., Cassin-Sackett, Loren, Atkinson, Carter T., Videvall, Elin, Campana, Michael G., and Fleischer, Robert C. 2023. [Dataset] Supplemental Data for "Gene expression reveals immune response strategies of naïve Hawaiian honeycreepers experimentally infected with introduced avian malaria". Distributed by Washington, DC: Smithsonian National Zoo and Conservation Biology Institute. https://doi.org/10.25573/DATA.22096553.V1.
Gene expression reveals immune response strategies of naïve Hawaiian honeycreepers experimentally infected with introduced avian malariaDOI: info:10.1093/jhered/esad017v. 114No. 4326–340
Paxton, Kristina L., Cassin-Sackett, Loren, Atkinson, Carter T., Videvall, Elin, Campana, Michael G., and Fleischer, Robert C. 2023. "Gene expression reveals immune response strategies of naïve Hawaiian honeycreepers experimentally infected with introduced avian malaria." Journal of Heredity, 114, (4) 326–340. https://doi.org/10.1093/jhered/esad017.
Annotation for Asian Elephant Em538 10x+Hi-C Genome AssemblyDOI: info:10.25573/DATA.22041383.V1Smithsonian National Zoo and Conservation Biology Institute
Prado, Natalia, Armstrong, Ellie E., Brown, Janine L., Goldenberg, Shifra, Leimgruber, Peter, Pearson, Virginia R., Maldonado, Jesús E., and Campana, Michael G. 2023. [Dataset] Annotation for Asian Elephant Em538 10x+Hi-C Genome Assembly. Distributed by Washington, DC: Smithsonian National Zoo and Conservation Biology Institute. https://doi.org/10.25573/DATA.22041383.V1.
Genomic resources for Asian () conservation and health researchDOI: info:10.1093/jhered/esad034v. 114No. 5529–538
Prado, Natalia A., Armstrong, Ellie E., Brown, Janine L., Goldenberg, Shifra Z., Leimgruber, Peter, Pearson, Virginia R., Maldonado, Jesús E., and Campana, Michael G. 2023. "Genomic resources for Asian (Elephas maximus) and African savannah elephant (Loxodonta africana) conservation and health research." Journal of Heredity, 114, (5) 529–538. https://doi.org/10.1093/jhered/esad034.
Test Dataset for 'RatesTools: a Nextflow pipeline for detecting de novo germline mutations in pedigree sequence data'DOI: info:10.25573/DATA.20250288.V2National Zoo and Smithsonian Conservation Biology Institute
Armstrong, Ellie E. and Campana, Michael G. 2022. [Dataset] Test Dataset for 'RatesTools: a Nextflow pipeline for detecting de novo germline mutations in pedigree sequence data'. Distributed by National Zoo and Smithsonian Conservation Biology Institute. https://doi.org/10.25573/DATA.20250288.V2.
Fleischer, Robert C., Campana, Michael G., and James, Helen F. 2022. "Hawaiian songbird radiations." Current Biology, 32, (20) R1070–R1072. https://doi.org/10.1016/j.cub.2022.08.057.
Conservation genomics and systematics of a near‐extinct island radiationDOI: info:10.1111/mec.16382Wiley
Kearns, Anna M., Campana, Michael G., Slikas, Beth, Berry, Lainie, Saitoh, Takema, Cibois, Alice, and Fleischer, Robert C. 2022. "Conservation genomics and systematics of a near‐extinct island radiation." Molecular ecology, https://doi.org/10.1111/mec.16382.
A comparative study of RNA yields from museum specimens, including an optimized protocol for extracting RNA from formalin-fixed specimensDOI: info:10.3389/fevo.2022.953131v. 10
Speer, Kelly A., Hawkins, Melissa T. R., Flores, Mary Faith C., McGowen, Michael R., Fleischer, Robert C., Maldonado, Jesús E., Campana, Michael G., and Muletz-Wolz, Carly. 2022. "A comparative study of RNA yields from museum specimens, including an optimized protocol for extracting RNA from formalin-fixed specimens." Frontiers in Ecology and Evolution, 10. https://doi.org/10.3389/fevo.2022.953131.
A gene-based capture assay for surveying patterns of genetic diversity and insecticide resistance in a worldwide group of invasive mosquitoesDOI: info:10.1371/journal.pntd.0010689v. 16No. 8
Aardema, Matthew L., Wagner, Nicole E., Ferreira, Francisco C., Campana, Michael G., and Fonseca, Dina M. 2022. "A gene-based capture assay for surveying patterns of genetic diversity and insecticide resistance in a worldwide group of invasive mosquitoes." PLOS Neglected Tropical Diseases, 16, (8). https://doi.org/10.1371/journal.pntd.0010689.
Genetic analyses are more sensitive than morphological inspection at detecting the presence of threatened Mojave desert tortoise (Gopherus agassizii) remains in canid scat and raven pelletsDOI: info:10.1111/csp2.12689Wiley
Parker, Lillian D., Quinta, Jessica D., Rivera, Isabel, Cypher, Brian L., Kelly, Erica C., Campana, Michael G., Fleischer, Robert C., Boarman, Ryan, Boarman, William I., and Maldonado, Jesus E. 2022. "Genetic analyses are more sensitive than morphological inspection at detecting the presence of threatened Mojave desert tortoise (Gopherus agassizii) remains in canid scat and raven pellets." Conservation Science and Practice, https://doi.org/10.1111/csp2.12689.
Dataset for "High-resolution canid identification from scats using SNP capture: the FAECES* method"DOI: info:10.25573/DATA.14633298.V1Smithsonian National Zoo and Conservation Biology Institute
Parker, Lillian and Campana, Michael G. 2022. [Dataset] Dataset for "High-resolution canid identification from scats using SNP capture: the FAECES* method". Distributed by Washington, DC: Smithsonian National Zoo and Conservation Biology Institute. https://doi.org/10.25573/DATA.14633298.V1.
Genome report: chromosome-level draft assemblies of the snow leopard, African leopard, and tiger ()DOI: info:10.1093/g3journal/jkac277v. 12No. 12Oxford University Press Incorporated
Armstrong, Ellie E., Solari, Katherine A., Morgan, Simon R., Naude, Vincent N., Campana, Michael G., Hadly, Elizabeth A., Petrov, Dmitri A., Ryder, Oliver A., Samelius, Gustaf, and Sharma, Koustubh. 2022. "Genome report: chromosome-level draft assemblies of the snow leopard, African leopard, and tiger (Panthera uncia, Panthera pardus pardus, and Panthera tigris)." G3-Genes Genomes Genetics, 12, (12). https://doi.org/10.1093/g3journal/jkac277.
Prado, Natalia A., Brown, Janine L., Zoller, Joseph A., Haghani, Amin, Yao, Mingjia, Bagryanova, Lora R., Campana, Michael G., Maldonado, Jesús E., Raj, Ken, Schmitt, Dennis, Robeck, Todd R., and Horvath, Steve. 2021. "Epigenetic clock and methylation studies in elephants." Aging Cell, https://doi.org/10.1111/acel.13414.
Assessing Biodiversity in the Phylogenomic EraDOI: info:10.3389/fevo.2021.803188v. 9FRONTIERS MEDIA SA
Hawkins, Melissa T. R., Caballero, Susana, and Campana, Michael G. 2021. "Assessing Biodiversity in the Phylogenomic Era." Frontiers in Ecology and Evolution, 9. https://doi.org/10.3389/fevo.2021.803188.
Population genomic structure of Eurasian and African foxtail millet landrace accessions inferred from genotyping-by-sequencingDOI: info:10.1002/tpg2.20081Wileye20081–e20081
Hunt, Harriet, V., Przelomska, Natalia A. S., Campana, Michael G., Cockram, James, Bligh, H. Frances J., Kneale, Catherine J., Romanova, Olga, I., Malinovskaya, Elena, V., and Jones, Martin K. 2021. "Population genomic structure of Eurasian and African foxtail millet landrace accessions inferred from genotyping-by-sequencing." Plant Genome, e20081–e20081. https://doi.org/10.1002/tpg2.20081.