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Showing 1-20 of about 49 results.
The role of holobiont composition and environmental history in thermotolerance of Tropical Eastern Pacific coralsDOI: info:10.1016/j.cub.2025.05.035
Glynn, Victoria M., de Barros Marangoni, Laura Fernandes, Guglielmetti, Maxime, Tapia, Eunice R., Ali, Viviane, Quintero, Helio, Rodriguez Guerra, E. Catalina, Yuval, Matan, Kline, David I., Leray, Matthieu, Connolly, Sean R., and Barrett, Rowan D. H. 2025. "The role of holobiont composition and environmental history in thermotolerance of Tropical Eastern Pacific corals." Current Biology, https://doi.org/10.1016/j.cub.2025.05.035.
ID: 176235
Type: article
Keywords: stri
Seasonal transcriptomic shifts reveal metabolic flexibility of chemosynthetic symbionts in an upwelling regionDOI: info:10.1128/msystems.01686-24AMER SOC MICROBIOLOGY
Morel-Letelier, Isidora, Yuen, Benedict, Orellana, Luis H., Kück, A. Carlotta, Camacho-García, Yolanda E., Lara, Minor, Leray, Matthieu, and Wilkins, Laetitia G. E. 2025. "Seasonal transcriptomic shifts reveal metabolic flexibility of chemosynthetic symbionts in an upwelling region." Msystems, https://doi.org/10.1128/msystems.01686-24.
ID: 176068
Type: article
Keywords: stri
Effects of bleaching on oxygen dynamics and energy metabolism of two Caribbean coral speciesDOI: info:10.1016/j.scitotenv.2024.170753v. 919170753
Linsmayer, L. B., Noel, S. K., Leray, Matthieu, Wangpraseurt, D., Hassibi, C., Kline, D. I., and Tresguerres, M. 2024. "Effects of bleaching on oxygen dynamics and energy metabolism of two Caribbean coral species." Science of The Total Environment, 919 170753. https://doi.org/10.1016/j.scitotenv.2024.170753.
ID: 173143
Type: article
Keywords: stri
Life goes on: Spatial heterogeneity promotes biodiversity in an urbanized coastal marine ecosystemDOI: info:10.1111/gcb.17248v. 30No. 4
McIlroy, Shelby E., Guibert, Isis, Archana, Anand, Chung, Wing Yi Haze, Duffy, J. E., Gotama, Rinaldi, Hui, Jerome, Knowlton, Nancy, Leray, Matthieu, Meyer, Christopher, Panagiotou, Gianni, Paulay, Gustav, Russell, Bayden, Thompson, Philip D., and Baker, David M. 2024. "Life goes on: Spatial heterogeneity promotes biodiversity in an urbanized coastal marine ecosystem." Global Change Biology, 30, (4). https://doi.org/10.1111/gcb.17248.
ID: 172215
Type: article
Keywords: nmnh; nh-invertebrate zoology; stri
Adaptations to nitrogen availability drive ecological divergence of chemosynthetic symbiontsDOI: info:10.1371/journal.pgen.1011295v. 20No. 5Public Library of Science
Morel-Letelier, Isidora, Yuen, Benedict, Kück, A. Carlotta, Camacho-García, Yolanda E., Petersen, Jillian M., Lara, Minor, Leray, Matthieu, Eisen, Jonathan A., Osvatic, Jay T., Gros, Olivier, and Wilkins, Laetitia G. E. 2024. "Adaptations to nitrogen availability drive ecological divergence of chemosynthetic symbionts." Plos Genetics, 20, (5). https://doi.org/10.1371/journal.pgen.1011295.
ID: 172902
Type: article
Keywords: stri
An integrative phylogeography for inferring cryptic speciation in the Alpheus lottini species complex, an important coral mutualistDOI: info:10.1016/j.isci.2024.111034v. 27No. 10
Rouzé, Héloïse, Knowlton, Nancy, Anker, Arthur, Hurt, Carla, Wirshing, Herman H., Van Wormhoudt, Alain, and Leray, Matthieu. 2024. "An integrative phylogeography for inferring cryptic speciation in the Alpheus lottini species complex, an important coral mutualist." iScience, 27, (10). https://doi.org/10.1016/j.isci.2024.111034.
ID: 174225
Type: article
Keywords: nh-invertebrate zoology; nmnh; stri
The First International eDNA Workshop in Hong Kong: A beginner's guide for the next‐generation eDNA researcherDOI: info:10.1002/edn3.552v. 6No. 3
Seymour, Mathew, Guibert, Isis, Jeunen, Gert‐Jan, Hellström, Micaela, Leray, Matthieu, Elbrect, Vasco, Lau, Anthony, Cutracci, Maxine, How, Chun Ming, Ip, Jack Chi Ho, Liu, Zifang, Moffitt, Jessica, Qian, Cheng, Qin, Xian, Tse, Cham Man, Wang, Yifu, Wang, Zhi, Zeng, Xiaoyi, and Zhao, Meihong. 2024. "The First International eDNA Workshop in Hong Kong: A beginner's guide for the next‐generation eDNA researcher." Environmental DNA, 6, (3). https://doi.org/10.1002/edn3.552.
ID: 172343
Type: article
Keywords: stri
Contrasting drivers of abundant phage and prokaryotic communities revealed in diverse coastal ecosystemsDOI: info:10.1038/s43705-023-00333-6v. 3No. 1127
Weinheimer, Alaina R., Aylward, Frank O., Leray, Matthieu, and Scott, Jarrod J. 2023. "Contrasting drivers of abundant phage and prokaryotic communities revealed in diverse coastal ecosystems." ISME Communications, 3, (1) 127. https://doi.org/10.1038/s43705-023-00333-6.
ID: 171421
Type: article
Keywords: stri
Evaluating biodiversity for coral reef reformation and monitoring on complex 3D structures using environmental DNA (eDNA) metabarcodingDOI: info:10.1016/j.scitotenv.2022.159051v. 856
Levy, Natalie, Simon-Blecher, Noa, Ben-Ezra, Shachaf, Yuval, Matan, Doniger, Tirza, Leray, Matthieu, Karako-Lampert, Sarit, Tarazi, Ezri, and Levy, Oren. 2023. "Evaluating biodiversity for coral reef reformation and monitoring on complex 3D structures using environmental DNA (eDNA) metabarcoding." Science of The Total Environment, 856. https://doi.org/10.1016/j.scitotenv.2022.159051.
ID: 170052
Type: article
Keywords: STRI
Unresolved taxonomy confounds invasive species identification: the Lysmata vittata Stimpson, 1860 (Decapoda: Caridea: Lysmatidae) species complex and recent introduction of Lysmata vittata sensu stricto in the western AtlanticDOI: info:10.1093/jcbiol/ruab079v. 42No. 1Oxford University Press
Aguilar, Robert, Prakash, Sanjeevi, Ogburn, Matthew B., Lohan, Katrina M. Pagenkopp, Macdonald, Kenneth S., Driskell, Amy C., Ahyong, Shane T., Leray, Matthieu, McIlroy, Shelby E., Tuckey, Troy D., and Baeza, J. Antonio. 2022. "Unresolved taxonomy confounds invasive species identification: the Lysmata vittata Stimpson, 1860 (Decapoda: Caridea: Lysmatidae) species complex and recent introduction of Lysmata vittata sensu stricto in the western Atlantic." Journal of Crustacean Biology, 42, (1). https://doi.org/10.1093/jcbiol/ruab079.
ID: 164283
Type: article
Keywords: NMNH; NH-Other; SERC; STRI; NH-SMS
The gut microbiome variability of a butterflyfish increases on severely degraded Caribbean reefsDOI: info:10.1038/s42003-022-03679-0v. 5No. 1Nature Portfolio
Clever, Friederike, Sourisse, Jade M., Preziosi, Richard F., Eisen, Jonathan A., Guerra, E. Catalina Rodriguez, Scott, Jarrod J., Wilkins, Laetitia G. E., Altieri, Andrew H., McMillan, W. Owen, and Leray, Matthieu. 2022. "The gut microbiome variability of a butterflyfish increases on severely degraded Caribbean reefs." Communications Biology, 5, (1). https://doi.org/10.1038/s42003-022-03679-0.
ID: 166066
Type: article
Keywords: stri
Metabarcoding the marine environment: from single species to biogeographic patternsDOI: info:10.1002/edn3.270v. 4No. 13–8
Gaither, Michelle R., DiBattista, Joseph D., Heyden, Sophie, and Leray, Matthieu. 2022. "Metabarcoding the marine environment: from single species to biogeographic patterns." Environmental DNA, 4, (1) 3–8. https://doi.org/10.1002/edn3.270.
ID: 164962
Type: article
Keywords: STRI
MIDORI2: A collection of quality controlled, preformatted, and regularly updated reference databases for taxonomic assignment of eukaryotic mitochondrial sequencesDOI: info:10.1002/edn3.303v. 4No. 4894–907
Machida, Ryuji J., Knowlton, Nancy, and Leray, Matthieu. 2022. "MIDORI2: A collection of quality controlled, preformatted, and regularly updated reference databases for taxonomic assignment of eukaryotic mitochondrial sequences." Environmental DNA, 4, (4) 894–907. https://doi.org/10.1002/edn3.303.
ID: 166501
Type: article
Keywords: NMNH; NH-Invertebrate Zoology; STRI
Pleistocene sea level changes and crocodile population histories on the Isthmus of Panama: A comment on Avila-Cervantes et al. (2020)DOI: info:10.1111/evo.14610Wiley
Flantua, Suzette G. A., Lueders-Dumont, Jessica A., Titcomb, Max C., Leray, Matthieu, and O'Dea, Aaron. 2022. "Pleistocene sea level changes and crocodile population histories on the Isthmus of Panama: A comment on Avila-Cervantes et al. (2020)." Evolution, https://doi.org/10.1111/evo.14610.
ID: 166469
Type: article
Keywords: STRI
A new species of Fabricius, 1798 (Decapoda: Caridea: Alpheidae) from the Caribbean coast of PanamaDOI: info:10.11646/zootaxa.4933.3.5v. 4933No. 3Magnolia Press379–390
Anker, Arthur, Leray, Matthieu, and Pachelle, Paulo P. G. 2021. "A new species of Alpheus Fabricius, 1798 (Decapoda: Caridea: Alpheidae) from the Caribbean coast of Panama." Zootaxa, 4933, (3) 379–390. https://doi.org/10.11646/zootaxa.4933.3.5.
ID: 158779
Type: article
Keywords: STRI
p Two new species of Typton Costa, 1844 from tropical American waters, with taxonomic notes on T. tortugae McClendon, 1911 and a new record of T. granulosusAyon-Parente, Hendrickx & Galvan-Villa, 2015 (Decapoda: Caridea: Palaemonidae)DOI: info:10.11646/zootaxa.4950.2.3v. 4950No. 2Magnolia Press267–295
Anker, Arthur, Pachelle, Paulo P. G., and Leray, Matthieu. 2021. "p Two new species of Typton Costa, 1844 from tropical American waters, with taxonomic notes on T. tortugae McClendon, 1911 and a new record of T. granulosusAyon-Parente, Hendrickx & Galvan-Villa, 2015 (Decapoda: Caridea: Palaemonidae)." Zootaxa, 4950, (2) 267–295. https://doi.org/10.11646/zootaxa.4950.2.3.
ID: 163462
Type: article
Keywords: STRI
The Coral Reef Sentinels Program: A Mars Shot for Blue Planetary HealthDOI: info:10.4031/MTSJ.55.3.51v. 55No. 3The Marine Technology Society Incorporated118–118
Kline, David, I., Dehgan, Alex, Bunje, Paul, Selbe, Shah, Chirayath, Ved, Pizarro, Oscar, Leray, Matthieu, Connolly, Sean, Bongaert, Pim, Treibitz, Tali, Levy, Oren, Kriegman, David, Andersson, Andreas, McField, Melanie D., and Duffy, J. Emmett. 2021. "The Coral Reef Sentinels Program: A Mars Shot for Blue Planetary Health." Marine Technology Society Journal, 55, (3) 118–118. https://doi.org/10.4031/MTSJ.55.3.51.
ID: 164222
Type: article
Keywords: STRI; SERC; NMNH; NH-SMS; NZP
Trade-offs between reducing complex terminology and producing accurate interpretations from environmental DNA: Comment on "Environmental DNA: What's behind the term?" by Pawlowski et al., (2020)DOI: info:10.1111/mec.15942v. 30No. 19Wiley4601–4605
Rodriguez-Ezpeleta, Naiara, Morissette, Olivier, Bean, Colin W., Manu, Shivakumara, Banerjee, Pritam, Lacoursiere-Roussel, Anais, Beng, Kingsly C., Alter, S. Elizabeth, Roger, Fabian, Holman, Luke E., Stewart, Kathryn A., Monaghan, Michael T., Mauvisseau, Quentin, Mirimin, Luca, Wangensteen, Owen S., Antognazza, Caterina M., Helyar, Sarah J., de Boer, Hugo, Monchamp, Marie-Eve, Nijland, Reindert, Abbott, Cathryn L., Doi, Hideyuki, Barnes, Matthew A., Leray, Matthieu, Hablutzel, Pascal I. et al. 2021. "Trade-offs between reducing complex terminology and producing accurate interpretations from environmental DNA: Comment on "Environmental DNA: What's behind the term?" by Pawlowski et al., (2020)." Molecular ecology, 30, (19) 4601–4605. https://doi.org/10.1111/mec.15942.
ID: 159571
Type: article
Keywords: STRI
Global biogeography of chemosynthetic symbionts reveals both localized and globally distributed symbiont groupsDOI: info:10.1073/pnas.2104378118v. 118No. 29National Academy of Sciences of the United States of America
Osvatic, Jay T., Wilkins, Laetitia G. E., Leibrecht, Lukas, Leray, Matthieu, Zauner, Sarah, Polzin, Julia, Camacho, Yolanda, Gros, Olivier, van Gils, Jan A., Eisen, Jonathan A., Petersen, Jillian M., and Yuen, Benedict. 2021. "Global biogeography of chemosynthetic symbionts reveals both localized and globally distributed symbiont groups." Proceedings of the National Academy of Sciences of the United States of America, 118, (29). https://doi.org/10.1073/pnas.2104378118.
ID: 160672
Type: article
Keywords: STRI
Natural experiments and long-term monitoring are critical to understand and predict marine host-microbe ecology and evolutionDOI: info:10.1371/journal.pbio.3001322v. 19No. 8Public Library of Science
Leray, Matthieu, Wilkins, Laetitia G. E., Apprill, Amy, Bik, Holly M., Clever, Friederike, Connolly, Sean R., De Leon, Marina E., Duffy, J. Emmett, Ezzat, Leila, Gignoux-Wolfsohn, Sarah, Herre, Edward Allen, Kaye, Jonathan Z., Kline, David I., Kueneman, Jordan G., McCormick, Melissa K., McMillan, W. Owen, O'Dea, Aaron, Pereira, Tiago J., Petersen, Jillian M., Petticord, Daniel F., Torchin, Mark E., Vega Thurber, Rebecca, Videvall, Elin, Wcislo, William T., Yuen, Benedict et al. 2021. "Natural experiments and long-term monitoring are critical to understand and predict marine host-microbe ecology and evolution." Plos Biology, 19, (8). https://doi.org/10.1371/journal.pbio.3001322.
ID: 160372
Type: article
Keywords: SERC