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Showing 1-20 of about 42 results.
Contrasting drivers of abundant phage and prokaryotic communities revealed in diverse coastal ecosystemsDOI: info:10.1038/s43705-023-00333-6v. 3No. 1127
Weinheimer, Alaina R., Aylward, Frank O., Leray, Matthieu, and Scott, Jarrod J. 2023. "Contrasting drivers of abundant phage and prokaryotic communities revealed in diverse coastal ecosystems." ISME Communications, 3, (1) 127. https://doi.org/10.1038/s43705-023-00333-6.
Evaluating biodiversity for coral reef reformation and monitoring on complex 3D structures using environmental DNA (eDNA) metabarcodingDOI: info:10.1016/j.scitotenv.2022.159051v. 856
Levy, Natalie, Simon-Blecher, Noa, Ben-Ezra, Shachaf, Yuval, Matan, Doniger, Tirza, Leray, Matthieu, Karako-Lampert, Sarit, Tarazi, Ezri, and Levy, Oren. 2023. "Evaluating biodiversity for coral reef reformation and monitoring on complex 3D structures using environmental DNA (eDNA) metabarcoding." Science of The Total Environment, 856. https://doi.org/10.1016/j.scitotenv.2022.159051.
Unresolved taxonomy confounds invasive species identification: the Lysmata vittata Stimpson, 1860 (Decapoda: Caridea: Lysmatidae) species complex and recent introduction of Lysmata vittata sensu stricto in the western AtlanticDOI: info:10.1093/jcbiol/ruab079v. 42No. 1Oxford University Press
Aguilar, Robert, Prakash, Sanjeevi, Ogburn, Matthew B., Lohan, Katrina M. Pagenkopp, Macdonald, Kenneth S., Driskell, Amy C., Ahyong, Shane T., Leray, Matthieu, McIlroy, Shelby E., Tuckey, Troy D., and Baeza, J. Antonio. 2022. "Unresolved taxonomy confounds invasive species identification: the Lysmata vittata Stimpson, 1860 (Decapoda: Caridea: Lysmatidae) species complex and recent introduction of Lysmata vittata sensu stricto in the western Atlantic." Journal of Crustacean Biology, 42, (1). https://doi.org/10.1093/jcbiol/ruab079.
The gut microbiome variability of a butterflyfish increases on severely degraded Caribbean reefsDOI: info:10.1038/s42003-022-03679-0v. 5No. 1Nature Portfolio
Clever, Friederike, Sourisse, Jade M., Preziosi, Richard F., Eisen, Jonathan A., Guerra, E. Catalina Rodriguez, Scott, Jarrod J., Wilkins, Laetitia G. E., Altieri, Andrew H., McMillan, W. Owen, and Leray, Matthieu. 2022. "The gut microbiome variability of a butterflyfish increases on severely degraded Caribbean reefs." Communications Biology, 5, (1). https://doi.org/10.1038/s42003-022-03679-0.
Metabarcoding the marine environment: from single species to biogeographic patternsDOI: info:10.1002/edn3.270v. 4No. 13–8
Gaither, Michelle R., DiBattista, Joseph D., Heyden, Sophie, and Leray, Matthieu. 2022. "Metabarcoding the marine environment: from single species to biogeographic patterns." Environmental DNA, 4, (1) 3–8. https://doi.org/10.1002/edn3.270.
MIDORI2: A collection of quality controlled, preformatted, and regularly updated reference databases for taxonomic assignment of eukaryotic mitochondrial sequencesDOI: info:10.1002/edn3.303v. 4No. 4894–907
Machida, Ryuji J., Knowlton, Nancy, and Leray, Matthieu. 2022. "MIDORI2: A collection of quality controlled, preformatted, and regularly updated reference databases for taxonomic assignment of eukaryotic mitochondrial sequences." Environmental DNA, 4, (4) 894–907. https://doi.org/10.1002/edn3.303.
Pleistocene sea level changes and crocodile population histories on the Isthmus of Panama: A comment on Avila-Cervantes et al. (2020)DOI: info:10.1111/evo.14610Wiley
Flantua, Suzette G. A., Lueders-Dumont, Jessica A., Titcomb, Max C., Leray, Matthieu, and O'Dea, Aaron. 2022. "Pleistocene sea level changes and crocodile population histories on the Isthmus of Panama: A comment on Avila-Cervantes et al. (2020)." Evolution, https://doi.org/10.1111/evo.14610.
A new species of Fabricius, 1798 (Decapoda: Caridea: Alpheidae) from the Caribbean coast of PanamaDOI: info:10.11646/zootaxa.4933.3.5v. 4933No. 3Magnolia Press379–390
Anker, Arthur, Leray, Matthieu, and Pachelle, Paulo P. G. 2021. "A new species of Alpheus Fabricius, 1798 (Decapoda: Caridea: Alpheidae) from the Caribbean coast of Panama." Zootaxa, 4933, (3) 379–390. https://doi.org/10.11646/zootaxa.4933.3.5.
p Two new species of Typton Costa, 1844 from tropical American waters, with taxonomic notes on T. tortugae McClendon, 1911 and a new record of T. granulosusAyon-Parente, Hendrickx & Galvan-Villa, 2015 (Decapoda: Caridea: Palaemonidae)DOI: info:10.11646/zootaxa.4950.2.3v. 4950No. 2Magnolia Press267–295
Anker, Arthur, Pachelle, Paulo P. G., and Leray, Matthieu. 2021. "p Two new species of Typton Costa, 1844 from tropical American waters, with taxonomic notes on T. tortugae McClendon, 1911 and a new record of T. granulosusAyon-Parente, Hendrickx & Galvan-Villa, 2015 (Decapoda: Caridea: Palaemonidae)." Zootaxa, 4950, (2) 267–295. https://doi.org/10.11646/zootaxa.4950.2.3.
The Coral Reef Sentinels Program: A Mars Shot for Blue Planetary HealthDOI: info:10.4031/MTSJ.55.3.51v. 55No. 3The Marine Technology Society Incorporated118–118
Kline, David, I., Dehgan, Alex, Bunje, Paul, Selbe, Shah, Chirayath, Ved, Pizarro, Oscar, Leray, Matthieu, Connolly, Sean, Bongaert, Pim, Treibitz, Tali, Levy, Oren, Kriegman, David, Andersson, Andreas, McField, Melanie D., and Duffy, J. Emmett. 2021. "The Coral Reef Sentinels Program: A Mars Shot for Blue Planetary Health." Marine Technology Society Journal, 55, (3) 118–118. https://doi.org/10.4031/MTSJ.55.3.51.
Trade-offs between reducing complex terminology and producing accurate interpretations from environmental DNA: Comment on "Environmental DNA: What's behind the term?" by Pawlowski et al., (2020)DOI: info:10.1111/mec.15942v. 30No. 19Wiley4601–4605
Rodriguez-Ezpeleta, Naiara, Morissette, Olivier, Bean, Colin W., Manu, Shivakumara, Banerjee, Pritam, Lacoursiere-Roussel, Anais, Beng, Kingsly C., Alter, S. Elizabeth, Roger, Fabian, Holman, Luke E., Stewart, Kathryn A., Monaghan, Michael T., Mauvisseau, Quentin, Mirimin, Luca, Wangensteen, Owen S., Antognazza, Caterina M., Helyar, Sarah J., de Boer, Hugo, Monchamp, Marie-Eve, Nijland, Reindert, Abbott, Cathryn L., Doi, Hideyuki, Barnes, Matthew A., Leray, Matthieu, Hablutzel, Pascal I. et al. 2021. "Trade-offs between reducing complex terminology and producing accurate interpretations from environmental DNA: Comment on "Environmental DNA: What's behind the term?" by Pawlowski et al., (2020)." Molecular ecology, 30, (19) 4601–4605. https://doi.org/10.1111/mec.15942.
Global biogeography of chemosynthetic symbionts reveals both localized and globally distributed symbiont groupsDOI: info:10.1073/pnas.2104378118v. 118No. 29National Academy of Sciences of the United States of America
Osvatic, Jay T., Wilkins, Laetitia G. E., Leibrecht, Lukas, Leray, Matthieu, Zauner, Sarah, Polzin, Julia, Camacho, Yolanda, Gros, Olivier, van Gils, Jan A., Eisen, Jonathan A., Petersen, Jillian M., and Yuen, Benedict. 2021. "Global biogeography of chemosynthetic symbionts reveals both localized and globally distributed symbiont groups." Proceedings of the National Academy of Sciences of the United States of America, 118, (29). https://doi.org/10.1073/pnas.2104378118.
Natural experiments and long-term monitoring are critical to understand and predict marine host-microbe ecology and evolutionDOI: info:10.1371/journal.pbio.3001322v. 19No. 8Public Library of Science
Leray, Matthieu, Wilkins, Laetitia G. E., Apprill, Amy, Bik, Holly M., Clever, Friederike, Connolly, Sean R., De Leon, Marina E., Duffy, J. Emmett, Ezzat, Leila, Gignoux-Wolfsohn, Sarah, Herre, Edward Allen, Kaye, Jonathan Z., Kline, David I., Kueneman, Jordan G., McCormick, Melissa K., McMillan, W. Owen, O'Dea, Aaron, Pereira, Tiago J., Petersen, Jillian M., Petticord, Daniel F., Torchin, Mark E., Vega Thurber, Rebecca, Videvall, Elin, Wcislo, William T., Yuen, Benedict et al. 2021. "Natural experiments and long-term monitoring are critical to understand and predict marine host-microbe ecology and evolution." Plos Biology, 19, (8). https://doi.org/10.1371/journal.pbio.3001322.
The gut microbiome variability of a butterflyfish increases on severely degraded Caribbean reefsDOI: info:10.5061/DRYAD.M905QFV28Dryad
Clever, Friederike, Sourisse, Jade M., Preziosi, Richard F., Eisen, Jonathan A., Rodriguez-Guerra, E. Catalina, Scott, Jarrod J., Wilkins, Laetitia G. E., Altieri, Andrew H., McMillan, W. Owen, and Leray, Matthieu. 2021. [Dataset] The gut microbiome variability of a butterflyfish increases on severely degraded Caribbean reefs. Distributed by Dryad. https://doi.org/10.5061/DRYAD.M905QFV28.
Rapid ecosystem-scale consequences of acute deoxygenation on a Caribbean coral reefDOI: info:10.1038/s41467-021-24777-3v. 12No. 1Nature Research
Johnson, Maggie D., Scott, Jarrod J., Leray, Matthieu, Lucey, Noelle, Bravo, Lucia M. Rodriguez, Wied, William L., and Altieri, Andrew H. 2021. "Rapid ecosystem-scale consequences of acute deoxygenation on a Caribbean coral reef." Nature Communications, 12, (1). https://doi.org/10.1038/s41467-021-24777-3.
New findings of the stenopodidean shrimp Microprosthema looensis Goy & Felder, 1988 (Decapoda: Stenopodidea: Spongicolidae)DOI: info:10.11646/zootaxa.4729.3.11v. 4729No. 3445–450
Ferreira, Luciane Augusto De Azevedo, Leray, Matthieu, and Anker, Arthur. 2020. "New findings of the stenopodidean shrimp Microprosthema looensis Goy & Felder, 1988 (Decapoda: Stenopodidea: Spongicolidae)." Zootaxa, 4729, (3) 445–450. https://doi.org/10.11646/zootaxa.4729.3.11.
REPLY TO LOCATELLI ET AL.: Evaluating species-level accuracy of GenBank metazoan sequences will require experts' effort in each groupDOI: info:10.1073/pnas.2019903117v. 117No. 51National Academy of Sciences32213–32214
Leray, Matthieu, Knowlton, Nancy, Ho, Shian-Lei, Nguyen, Bryan N., and Machida, Ryuji J. 2020. "REPLY TO LOCATELLI ET AL.: Evaluating species-level accuracy of GenBank metazoan sequences will require experts' effort in each group." Proceedings of the National Academy of Sciences of the United States of America, 117, (51) 32213–32214. https://doi.org/10.1073/pnas.2019903117.
Leray, Matthieu and Machida, Ryuji J. 2020. "Seabed mining could come at a high price for a unique fauna." Molecular ecology, https://doi.org/10.1111/mec.15678.
Environmental DNA survey captures patterns of fish and invertebrate diversity across a tropical seascapeDOI: info:10.1038/s41598-020-63565-9v. 10No. 1Nature ResearchArticle 6729
Nguyen, Bryan N., Shen, Elaine W., Seemann, Janina, Correa, Adrienne M. S., O'Donnell, James L., Altieri, Andrew H., Knowlton, Nancy, Crandall, Keith A., Egan, Scott P., McMillan, W. Owen, and Leray, Matthieu. 2020. "Environmental DNA survey captures patterns of fish and invertebrate diversity across a tropical seascape." Scientific Reports, 10, (1) Article 6729. https://doi.org/10.1038/s41598-020-63565-9.
Hyperdiverse Macrofauna Communities Associated with a Common Sponge, , Shift across Ecological Gradients in the Central Red SeaDOI: info:10.3390/d11020018v. 11No. 2MDPI18
Kandler, Nora, Wooster, Michael, Leray, Matthieu, Knowlton, Nancy, de Voogd, Nicole, Paulay, Gustav, and Berumen, Michael. 2019. "Hyperdiverse Macrofauna Communities Associated with a Common Sponge, Stylissa carteri, Shift across Ecological Gradients in the Central Red Sea." Diversity, 11, (2) 18. https://doi.org/10.3390/d11020018.