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Showing 1-20 of about 74 results.
Kelly, Ryan P., Lodge, David M., Lee, Kai N., Theroux, Susanna, Sepulveda, Adam J., Scholin, Christopher A., Craine, Joseph M., Andruszkiewicz Allan, Elizabeth, Nichols, Krista M., Parsons, Kim M., Goodwin, Kelly D., Gold, Zachary, Chavez, Francisco P., Noble, Rachel T., Abbott, Cathryn L., Baerwald, Melinda R., Naaum, Amanda M., Thielen, Peter M., Simons, Ariel Levi, Jerde, Christopher L., Duda, Jeffrey J., Hunter, Margaret E., Hagan, John A., Meyer, Rachel Sarah, Steele, Joshua A. et al. 2024. "Toward a national eDNA strategy for the United States." Environmental DNA, 6, (1). https://doi.org/10.1002/edn3.432.
Skimming for barcodes: rapid production of mitochondrial genome and nuclear ribosomal repeat reference markers through shallow shotgun sequencingDOI: info:10.7717/peerj.13790v. 10PeerJ Incorporated
Hoban, Mykle L., Whitney, Jonathan, Collins, Allen G., Meyer, Christopher, Murphy, Katherine R., Reft, Abigail J., and Bemis, Katherine E. 2022. "Skimming for barcodes: rapid production of mitochondrial genome and nuclear ribosomal repeat reference markers through shallow shotgun sequencing." PeerJ, 10. https://doi.org/10.7717/peerj.13790.
Unified methods in collecting, preserving, and archiving coral bleaching and restoration specimens to increase sample utility and interdisciplinary collaborationDOI: info:10.7717/peerj.14176v. 10PeerJ Incorporated
Thurber, Rebecca Vega, Schmeltzer, Emily R., Grottoli, Andréa G., Van Woesik, Robert, Toonen, Robert J., Warner, Mark, Dobson, Kerri L., McLachlan, Rowan H., Barott, Katie, Barshis, Daniel J., Baumann, Justin, Chapron, Leila, Combosch, David J., Correa, Adrienne M. S., DeCarlo, Thomas M., Hagedorn, Mary, Hédouin, Laetitia, Hoadley, Kenneth, Felis, Thomas, Ferrier-Pagès, Christine, Kenkel, Carly, Kuffner, Ilsa B., Matthews, Jennifer, Medina, Mónica, Meyer, Christopher et al. 2022. "Unified methods in collecting, preserving, and archiving coral bleaching and restoration specimens to increase sample utility and interdisciplinary collaboration." Peerj, 10. https://doi.org/10.7717/peerj.14176.
DNA metabarcoding marker choice skews perception of marine eukaryotic biodiversityDOI: info:10.1002/edn3.245v. 3No. 61229–1246
Casey, Jordan M., Ransome, Emma, Collins, Allen G., Mahardini, Angka, Kurniasih, Eka M., Sembiring, Andrianus, Schiettekatte, Nina M. D., Cahyani, Ni Kadek Dita, Wahyu Anggoro, Aji, Moore, Mikaela, Uehling, Abby, Belcaid, Mahdi, Barber, Paul H., Geller, Jonathan B., and Meyer, Christopher P. 2021. "DNA metabarcoding marker choice skews perception of marine eukaryotic biodiversity." Environmental DNA, 3, (6) 1229–1246. https://doi.org/10.1002/edn3.245.
Internet of Samples (iSamples): Toward an interdisciplinary cyberinfrastructure for material samplesDOI: info:10.1093/gigascience/giab028v. 10No. 5Oxford University Press
Davies, Neil, Deck, John, Kansa, Eric C., Kansa, Sarah Whitcher, Kunze, John, Meyer, Christopher, Orrell, Thomas, Ramdeen, Sarah, Snyder, Rebecca A., Vieglais, Dave, Walls, Ramona L., and Lehnert, Kerstin. 2021. "Internet of Samples (iSamples): Toward an interdisciplinary cyberinfrastructure for material samples." GigaScience, 10, (5). https://doi.org/10.1093/gigascience/giab028.
Effects of low pH on the coral reef cryptic invertebrate communities near CO2 vents in Papua New GuineaDOI: info:10.1371/journal.pone.0258725v. 16No. 12Public Library of Science
Plaisance, Laetitia, Matterson, Kenan, Fabricius, Katharina, Drovetski, Sergei V., Meyer, Christopher P., and Knowlton, Nancy. 2021. "Effects of low pH on the coral reef cryptic invertebrate communities near CO2 vents in Papua New Guinea." PLOS ONE, 16, (12). https://doi.org/10.1371/journal.pone.0258725.
Internet of Samples: Creating and Mapping Controlled Vocabularies for Specimen Type, Material Type, and Sampled FeatureDOI: info:10.1002/essoar.10509093.11
Vieglais, Dave, Gan, Quan, Zhou, Yuxuan, Richard, Stephen, Cui, Hong, Davies, Neil, Deck, John, Kansa, Eric, Kansa, Sarah, Kunze, John, Mandel, Danny, Meyer, Christopher P., Orrell, Thomas M., Ramdeen, Sarah, Snyder, Rebecca A., Walls, Ramona, and Lehnert, Kerstin. 2021. "Internet of Samples: Creating and Mapping Controlled Vocabularies for Specimen Type, Material Type, and Sampled Feature." Earth and Space Science, 1. https://doi.org/10.1002/essoar.10509093.1.
Environmental DNA in a global biodiversity hotspot: Lessons from coral reef fish diversity across the Indonesian archipelagoDOI: info:10.1002/edn3.257
Marwayana, Onny N., Gold, Zachary, Barber, Paul H., and Meyer, Christopher P. 2021. "Environmental DNA in a global biodiversity hotspot: Lessons from coral reef fish diversity across the Indonesian archipelago." Environmental DNA, https://doi.org/10.1002/edn3.257.
Richard, Stephen M., Vieglais, Dave, Cui, Hong, Davies, Neil, Deck, John, Gan, Quan, Kansa, Eric C., Kansa, Sarah Whitcher, Kunze, John, Mandel, Danny, Meyer, Christopher P., Orrell, Thomas M., Ramdeen, Sarah, Snyder, Rebecca A., Walls, Ramona L., Zhou, Yuxuan, and Lehnert, Kerstin. 2021. "Internet of Samples." Proceedings of the Association for Information Science and Technology, 58, (1) 813–815. https://doi.org/10.1002/pra2.572.
The U.S. Ocean BiocodeDOI: info:10.4031/MTSJ.55.3.33v. 55No. 3The Marine Technology Society Incorporated140–141
Collins, Allen G., Paulay, Gustav, Meyer, Christopher P., Duffy, J. Emmett, and Wetzer, Regina. 2021. "The U.S. Ocean Biocode." Marine Technology Society Journal, 55, (3) 140–141. https://doi.org/10.4031/MTSJ.55.3.33.
Toward a Global Public Repository of Community Protocols to Encourage Best Practices in Biomolecular Ocean Observing and ResearchDOI: info:10.3389/fmars.2021.758694v. 8
Samuel, Robyn M., Meyer, Raissa, Buttigieg, Pier Luigi, Davies, Neil, Jeffery, Nicholas W., Meyer, Christopher P., Pavloudi, Christina, Pitz, Kathleen Johnson, Sweetlove, Maxime, Theroux, Susanna, van de Kamp, Jodie, and Watts, Alison. 2021. "Toward a Global Public Repository of Community Protocols to Encourage Best Practices in Biomolecular Ocean Observing and Research." Frontiers in Marine Science, 8. https://doi.org/10.3389/fmars.2021.758694.
Assessment of mitochondrial genomes for heterobranch gastropod phylogeneticsDOI: info:10.1186/s12862-020-01728-yv. 21
Varney, Rebecca M., Brenzinger, Bastian, Malaquias, Manuel António E., Schrödl, Michael, Meyer, Christopher P., and Kocot, Kevin M. 2021. "Assessment of mitochondrial genomes for heterobranch gastropod phylogenetics." BMC Ecology and Evolution, 21. https://doi.org/10.1186/s12862-020-01728-y.
Dietary and habitat niche partitioning in congeneric cryptobenthic reef fish speciesDOI: info:10.1007/s00338-020-01892-zv. 39Springer305–317
Brandl, Simon J., Casey, Jordan M., and Meyer, Christopher P. 2020. "Dietary and habitat niche partitioning in congeneric cryptobenthic reef fish species." Coral Reefs, 39 305–317. https://doi.org/10.1007/s00338-020-01892-z.
A Marine Biodiversity Observation Network for Genetic Monitoring of Hard-Bottom Communities (ARMS-MBON)DOI: info:10.3389/fmars.2020.572680v. 7Frontiers Media SA
Obst, Matthias, Exter, Katrina, Allcock, A. Louise, Arvanitidis, Christos, Axberg, Alizz, Bustamante, Maria, Cancio, Ibon, Carreira-Flores, Diego, Chatzinikolaou, Eva, Chatzigeorgiou, Giorgos, Chrismas, Nathan, Clark, Melody S., Comtet, Thierry, Dailianis, Thanos, Davies, Neil, Deneudt, Klaas, de Cerio, Oihane Diaz, Fortic, Ana, Gerovasileiou, Vasilis, Hablutzel, Pascal, I., Keklikoglou, Kleoniki, Kotoulas, Georgios, Lasota, Rafal, Leite, Barbara R., Loisel, Stephane et al. 2020. "A Marine Biodiversity Observation Network for Genetic Monitoring of Hard-Bottom Communities (ARMS-MBON)." Frontiers in Marine Science, 7. https://doi.org/10.3389/fmars.2020.572680.
Building a global genomics observatory: Using GEOME (the Genomic Observatories Metadatabase) to expedite and improve deposition and retrieval of genetic data and metadata for biodiversity researchDOI: info:10.1111/1755-0998.13269v. 20No. 6Wiley1458–1469
Riginos, Cynthia, Crandall, Eric D., Liggins, Libby, Gaither, Michelle R., Ewing, Rodney B., Meyer, Christopher, Andrews, Kimberly R., Euclide, Peter T., Titus, Benjamin M., Overgaard Therkildsen, Nina, Salces‐Castellano, Antonia, Stewart, Lucy C., Toonen, Robert J., and Deck, John. 2020. "Building a global genomics observatory: Using GEOME (the Genomic Observatories Metadatabase) to expedite and improve deposition and retrieval of genetic data and metadata for biodiversity research." Molecular Ecology Resources, 20, (6) 1458–1469. https://doi.org/10.1111/1755-0998.13269.
Host identity and symbiotic association affects the taxonomic and functional diversity of the clownfish-hosting sea anemone microbiomeDOI: info:10.1098/rsbl.2019.0738v. 16No. 2The Royal Society
Titus, Benjamin M., Laroche, Robert, Rodríguez, Estefanía, Wirshing, Herman H., and Meyer, Christopher P. 2020. "Host identity and symbiotic association affects the taxonomic and functional diversity of the clownfish-hosting sea anemone microbiome." Biology Letters, 16, (2). https://doi.org/10.1098/rsbl.2019.0738.
Categorization of species as native or nonnative using DNA sequence signatures without a complete reference libraryDOI: info:10.1002/eap.1914v. 29No. 5
Andersen, Jeremy C., Oboyski, Peter, Davies, Neil, Charlat, Sylvain, Ewing, Curtis, Meyer, Christopher, Krehenwinkel, Henrik, Lim, Jun Ying, Suzuki, Noriyuki, Ramage, Thibault, Gillespie, Rosemary G., and Roderick, George K. 2019. "Categorization of species as native or nonnative using DNA sequence signatures without a complete reference library." Ecological Applications: A Publication of the Ecological Society of America, 29, (5). https://doi.org/10.1002/eap.1914.
Reconstructing hyperdiverse food webs: Gut content metabarcoding as a tool to disentangle trophic interactions on coral reefsDOI: info:10.1111/2041-210X.13206v. 10No. 8WILEY1157–1170
Casey, Jordan M., Meyer, Christopher P., Morat, Fabien, Brandl, Simon J., Planes, Serge, and Parravicini, Valeriano. 2019. "Reconstructing hyperdiverse food webs: Gut content metabarcoding as a tool to disentangle trophic interactions on coral reefs." Methods in Ecology and Evolution, 10, (8) 1157–1170. https://doi.org/10.1111/2041-210X.13206.
A DNA barcode reference library of French Polynesian shore fishesDOI: info:10.1038/s41597-019-0123-5v. 6No. 1Nature Publishing Group114
Delrieu-Trottin, Erwan, Williams, Jeffrey T., Pitassy, Diane, Driskell, Amy, Hubert, Nicolas, Viviani, Jérémie, Cribb, Thomas H., Espiau, Benoit, Galzin, René, Kulbicki, Michel, Lison, de Loma, Meyer, Christopher, Mourier, Johann, Mou-Tham, Gérard, Parravicini, Valeriano, Plantard, Patrick, Sasal, Pierre, Siu, Gilles, Tolou, Nathalie, Veuille, Michel, Weigt, Lee, and Planes, Serge. 2019. "A DNA barcode reference library of French Polynesian shore fishes." Scientific Data, 6, (1) 114. https://doi.org/10.1038/s41597-019-0123-5.
Dietary partitioning promotes the coexistence of planktivorous species on coral reefsDOI: info:10.1111/mec.15090v. 28No. 10Wiley2694–2710
Leray, Matthieu, Alldredge, Alice L., Yang, Joy Y., Meyer, Christopher P., Holbrook, Sally J., Schmitt, Russell J., Knowlton, Nancy, and Brooks, Andrew J. 2019. "Dietary partitioning promotes the coexistence of planktivorous species on coral reefs." Molecular ecology, 28, (10) 2694–2710. https://doi.org/10.1111/mec.15090.