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Showing 1-20 of about 203 results.
Recent, Intricate Speciation in Amazonia Uncovered by a Multilayered Genomic Analysis of Tree SquirrelsDOI: info:10.1093/sysbio/syaf013
Abreu, Edson F., Prado, Joyce R., Maldonado, Jesús E., Wilson, Don E., Percequillo, Alexandre R., and Pavan, Silvia E. 2025. "Recent, Intricate Speciation in Amazonia Uncovered by a Multilayered Genomic Analysis of Tree Squirrels." Systematic Biology, https://doi.org/10.1093/sysbio/syaf013.
Parameterizing Pantherinae: De Novo Mutation Rate Estimates from PedigreesDOI: info:10.1093/gbe/evaf060v. 17No. 4
Armstrong, Ellie E., Carey, Sarah B., Harkess, Alex, Zenato Lazzari, Gabriele, Solari, Katherine A., Maldonado, Jesús E., Fleischer, Robert C., Aziz, Neel, Walsh, Patricia, Koepfli, Klaus-Peter, Eizirik, Eduardo, Petrov, Dmitri A., and Campana, Michael G. 2025. "Parameterizing Pantherinae: De Novo Mutation Rate Estimates from Panthera and Neofelis Pedigrees." Genome Biology and Evolution, 17, (4). https://doi.org/10.1093/gbe/evaf060.
Author Correction: Markers of fertility in reproductive microbiomes of male and female endangered black-footed ferrets (Mustela nigripes)DOI: info:10.1038/s42003-024-06793-3v. 7No. 1
Bornbusch, Sally L., Bamford, Alexandra, Thacher, Piper, Crosier, Adrienne, Marinari, Paul, Bortner, Robyn, Garelle, Della, Livieri, Travis, Santymire, Rachel, Comizzoli, Pierre, Maslanka, Michael, Maldonado, Jesús E., Koepfli, Klaus-Peter, Muletz-Wolz, Carly, and DeCandia, Alexandra L. 2024. "Author Correction: Markers of fertility in reproductive microbiomes of male and female endangered black-footed ferrets (Mustela nigripes)." Communications Biology, 7, (1). https://doi.org/10.1038/s42003-024-06793-3.
Markers of fertility in reproductive microbiomes of male and female endangered black-footed ferrets (Mustela nigripes)DOI: info:10.1038/s42003-024-05908-0v. 7No. 1224
Bornbusch, Sally L., Bamford, Alexandra, Thacher, Piper, Crosier, Adrienne, Marinari, Paul, Bortner, Robyn, Garelle, Della, Livieri, Travis, Santymire, Rachel, Comizzoli, Pierre, Maslanka, Michael, Maldonado, Jesús E., Koepfli, Klaus-Peter, Muletz-Wolz, Carly, and DeCandia, Alexandra L. 2024. "Markers of fertility in reproductive microbiomes of male and female endangered black-footed ferrets (Mustela nigripes)." Communications Biology, 7, (1) 224. https://doi.org/10.1038/s42003-024-05908-0.
Unveiling hidden diversity: Phylogenomics of neotomine rodents and taxonomic implications for the genus PeromyscusDOI: info:10.1016/j.ympev.2024.108233
Castañeda-Rico, Susette, Maldonado, Jesús E., Hawkins, Melissa T. R., and Edwards, Cody W. 2024. "Unveiling hidden diversity: Phylogenomics of neotomine rodents and taxonomic implications for the genus Peromyscus." Molecular phylogenetics and evolution, https://doi.org/10.1016/j.ympev.2024.108233.
Phylosymbiosis and Elevated Cancer Risk in Genetically Depauperate Channel Island FoxesDOI: info:10.1111/mec.17610
DeCandia, Alexandra L., Lu, Jasmine, Hamblen, Emily E., Brenner, Lara J., King, Julie L., Gagorik, Calypso N., Schamel, Juliann T., Baker, Stacy S., Ferrara, Francesca J., Booker, Melissa, Bridges, Andrew, Carrasco, Cesar, VonHoldt, Bridgett M., Koepfli, Klaus‐Peter, and Maldonado, Jesús E. 2024. "Phylosymbiosis and Elevated Cancer Risk in Genetically Depauperate Channel Island Foxes." Molecular ecology, https://doi.org/10.1111/mec.17610.
Unraveling genomic features and phylogenomics through the analysis of three Mexican endemic genomesDOI: info:10.7717/peerj.17651v. 12
Gutiérrez, Edgar G., Maldonado, Jesus E., Castellanos-Morales, Gabriela, Eguiarte, Luis E., Martínez-Méndez, Norberto, and Ortega, Jorge. 2024. "Unraveling genomic features and phylogenomics through the analysis of three Mexican endemic Myotis genomes." PeerJ, 12. https://doi.org/10.7717/peerj.17651.
Lost in synonymy: Integrative species delimitation reveals two unrecognized species of Southern Asian tree squirrels (Rodentia: Sciuridae: Callosciurinae)DOI: info:10.3897/vz.74.e133467v. 74Staatliches Museum Tierkunde Dresden683–707
Hinckley, Arlo, Maldonado, Jesús E., Tamura, Noriko, Leonard, Jennifer A., and Hawkins, Melissa T. R. 2024. "Lost in synonymy: Integrative species delimitation reveals two unrecognized species of Southern Asian tree squirrels (Rodentia: Sciuridae: Callosciurinae)." Vertebrate Zoology, 74 683–707. https://doi.org/10.3897/vz.74.e133467.
The gut microbiomes of Channel Island foxes and island spotted skunks exhibit fine‐scale differentiation across host species and island populationsDOI: info:10.1002/ece3.11017v. 14No. 2
Pasciullo Boychuck, Samantha, Brenner, Lara J., Gagorik, Calypso N., Schamel, Juliann T., Baker, Stacy, Tran, Elton, VonHoldt, Bridgett M., Koepfli, Klaus‐Peter, Maldonado, Jesús E., and DeCandia, Alexandra L. 2024. "The gut microbiomes of Channel Island foxes and island spotted skunks exhibit fine‐scale differentiation across host species and island populations." Ecology and Evolution, 14, (2). https://doi.org/10.1002/ece3.11017.
Social and genetic relationships among individuals in urban kit fox social groupsDOI: info:10.1139/cjz-2024-0057
Ralls, Katherine, Wilbert, Tammy, Cypher, Brian, Van Horn Job, Christine, and Maldonado, Jesus E. 2024. "Social and genetic relationships among individuals in urban kit fox social groups." Canadian journal of zoology, https://doi.org/10.1139/cjz-2024-0057.
Enhancing biodiversity: historical ecology and biogeography of the Santa Catalina Island ground squirrel, DOI: info:10.1098/rsos.240726v. 11No. 11
Rick, Torben C., Radde, Hugh D., Teeter, Wendy G., Elliott Smith, Emma A., Alvitre, Cindi M., Dagtas, Nihan D., Kennedy-Richardson, Karimah, King, Julie L., Martinez, Desireé R., Schnorr, Stephanie, Shirazi, Sabrina, Maldonado, Jesús E., and Hofman, Courtney A. 2024. "Enhancing biodiversity: historical ecology and biogeography of the Santa Catalina Island ground squirrel, Otospermophilus beecheyi nesioticus." Royal Society Open Science, 11, (11). https://doi.org/10.1098/rsos.240726.
Interaction of sound-audition traits between eared insects and arthropodophagous bats: using a DNA approach to assess dietDOI: info:10.1093/jmammal/gyae037v. 105No. 4838–853
Segura-Trujillo, Cintya, Iñiguez-Dávalos, Luis Ignacio, Álvarez-Castañeda, Sergio Ticul, Castañeda-Rico, Susette, and Maldonado, Jesús E. 2024. "Interaction of sound-audition traits between eared insects and arthropodophagous bats: using a DNA approach to assess diet." Journal of mammalogy, 105, (4) 838–853. https://doi.org/10.1093/jmammal/gyae037.
Epigenetic changes to gene pathways linked to male fertility in ex situ black-footed ferretsDOI: info:10.1111/eva.13634v. 17No. 1WILEY
Tennenbaum, Stavi R., Bortner, Robyn, Lynch, Colleen, Santymire, Rachel, Crosier, Adrienne, Santiestevan, Jenny, Marinari, Paul, Pukazhenthi, Budhan S., Comizzoli, Pierre, Hawkins, Melissa T. R., Maldonado, Jesús E., Koepfli, Klaus-Peter, VonHoldt, Bridgett M., and DeCandia, Alexandra L. 2024. "Epigenetic changes to gene pathways linked to male fertility in ex situ black-footed ferrets." Evolutionary Applications, 17, (1). https://doi.org/10.1111/eva.13634.
An 1896 specimen helps clarify the phylogenetic placement of the Mexican endemic Hooper’s deer mouseDOI: info:10.12933/therya-23-2243v. 14No. 1181–195
Castañeda-Rico, Susette, Edwards, Cody W., Hawkins, Melissa T. R., and Maldonado, Jesús E. 2023. "An 1896 specimen helps clarify the phylogenetic placement of the Mexican endemic Hooper’s deer mouse." Therya, 14, (1) 181–195. https://doi.org/10.12933/therya-23-2243.
Novel genomic resources contribute to the systematics of threatened arboreal deer mice of the genus Habromys Hooper & Musser, 1964 (Cricetidae, Neotominae) within a neotomine–peromyscine phylogenyDOI: info:10.3897/zookeys.1179.108759v. 1179No. 1157–168
Castañeda-Rico, Susette, Parker, Lillian D., Sánchez, Evelyn, Rivas-Trasvina, Sheccid, Hawkins, Melissa T. R., Edwards, Cody W., and Maldonado, Jesús E. 2023. "Novel genomic resources contribute to the systematics of threatened arboreal deer mice of the genus Habromys Hooper & Musser, 1964 (Cricetidae, Neotominae) within a neotomine–peromyscine phylogeny." ZooKeys, 1179, (1) 157–168. https://doi.org/10.3897/zookeys.1179.108759.
Dataset: Novel genomic resources contribute to the systematics of threatened arboreal deer mice of the genus Hooper & Musser, 1964 (Cricetidae, Neotominae) within a neotomine–peromyscine phylogenyDOI: info:10.25573/DATA.23563929.V1Smithsonian National Zoo and Conservation Biology Institute
Castañeda-Rico, Susette, Parker, Lillian D., Sánchez, Evelyn, Rivas-Trasvina, Sheccid, Hawkins, Melissa T. R., Edwards, Cody W., and Maldonado, Jesús E. 2023. [Dataset] Dataset: Novel genomic resources contribute to the systematics of threatened arboreal deer mice of the genus Habromys Hooper & Musser, 1964 (Cricetidae, Neotominae) within a neotomine–peromyscine phylogeny. Distributed by Washington, DC: Smithsonian National Zoo and Conservation Biology Institute. https://doi.org/10.25573/DATA.23563929.V1.
Taxonomic re-evaluation of New World (Chiroptera: Vespertilionidae), with the description of a new genusDOI: info:10.1590/s1984-4689.v40.e22029v. 40
Cláudio, Vinícius C., Novaes, Roberto L. M., Gardner, Alfred L., Nogueira, Marcelo R., Wilson, Don E., Maldonado, Jesús E., Oliveira, João A., and Moratelli, Ricardo. 2023. "Taxonomic re-evaluation of New World Eptesicus and Histiotus (Chiroptera: Vespertilionidae), with the description of a new genus." Zoologia (Curitiba), 40. https://doi.org/10.1590/s1984-4689.v40.e22029.
Gut bacterial composition shows sex-specific shifts during breeding season in ex situ managed black-footed ferretsDOI: info:10.1093/jhered/esad065
DeCandia, Alexandra L., Adeduro, Laura, Thacher, Piper, Crosier, Adrienne, Marinari, Paul, Bortner, Robyn, Garelle, Della, Livieri, Travis, Santymire, Rachel, Comizzoli, Pierre, Maslanka, Michael, Maldonado, Jesús E., Koepfli, Klaus-Peter, Muletz-Wolz, Carly, and Bornbusch, Sally L. 2023. "Gut bacterial composition shows sex-specific shifts during breeding season in ex situ managed black-footed ferrets." Journal of Heredity, https://doi.org/10.1093/jhered/esad065.
An integrative taxonomic revision of lesser gymnures (Eulipotyphla: ) reveals five new species and emerging patterns of local endemism in Tropical East AsiaDOI: info:10.1093/zoolinnean/zlad177
Hinckley, Arlo, Camacho-Sanchez, Miguel, Chua, Marcus A. H., Ruedi, Manuel, Lunde, Darrin, Maldonado, Jesús E., Omar, Hasmahzaiti, Leonard, Jennifer A., and Hawkins, Melissa T. R. 2023. "An integrative taxonomic revision of lesser gymnures (Eulipotyphla: Hylomys) reveals five new species and emerging patterns of local endemism in Tropical East Asia." Zoological Journal of the Linnean Society, https://doi.org/10.1093/zoolinnean/zlad177.
Evolutionary history and patterns of divergence in three tropical east Asian squirrels across the Isthmus of KraDOI: info:10.1111/jbi.14598v. 50No. 61090–1102
Hinckley, Arlo, Hawkins, Melissa T. R., Maldonado, Jesús E., and Leonard, Jennifer A. 2023. "Evolutionary history and patterns of divergence in three tropical east Asian squirrels across the Isthmus of Kra." Journal of Biogeography, 50, (6) 1090–1102. https://doi.org/10.1111/jbi.14598.